Let KAYAK do the searching
Based on KAYAK hotel searches, the most popular destination is Ōtsu (50% of total searches to Shiga Prefecture). The next most popular destinations are Moriyama (33%) and Kusatsu (17%).
KAYAK users have found double rooms in Shiga Prefecture for as cheap as $55 (Ōtsu) in the last 3 days. The average price is $354.